Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.23□□□□□ -0.61
Cd40lgP27548 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.23□□□□□ -0.61
Cd40lgP27548 Gm14999-201ENSMUST00000121039 624 ntBASIC11.23□□□□□ -0.61
Cd40lgP27548 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.23□□□□□ -0.61
Cd40lgP27548 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Cd40lgP27548 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Cd40lgP27548 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.23□□□□□ -0.61
Cd40lgP27548 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.23□□□□□ -0.61
Cd40lgP27548 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cd40lgP27548 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.23□□□□□ -0.61
Cd40lgP27548 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cd40lgP27548 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.23□□□□□ -0.61
Cd40lgP27548 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm15703-201ENSMUST00000120250 880 ntBASIC11.22□□□□□ -0.61
Cd40lgP27548 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm7584-201ENSMUST00000175829 940 ntBASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm27046-201ENSMUST00000182160 463 ntBASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm27243-201ENSMUST00000183964 521 ntBASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm3096-201ENSMUST00000185770 364 ntBASIC11.22□□□□□ -0.61
Cd40lgP27548 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.22□□□□□ -0.61
Cd40lgP27548 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Cd40lgP27548 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cd40lgP27548 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cd40lgP27548 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.21□□□□□ -0.61
Cd40lgP27548 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cd40lgP27548 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms