Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm7238-201ENSMUST00000206467 973 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm9520-201ENSMUST00000209460 1253 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Tnfrsf9P20334 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm14130-201ENSMUST00000118417 987 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm11331-201ENSMUST00000119764 288 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm13570-201ENSMUST00000140763 309 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm24548-201ENSMUST00000158650 108 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm9931-201ENSMUST00000193584 1185 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm45610-201ENSMUST00000209227 784 ntBASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Tnfrsf9P20334 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Tnfrsf9P20334 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC10.14□□□□□ -0.79
Tnfrsf9P20334 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms