Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.29□□□□□ -0.44
PdgfrbP05622 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
PdgfrbP05622 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
PdgfrbP05622 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm23912-201ENSMUST00000104687 87 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm14201-201ENSMUST00000117627 289 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Mir1938-201ENSMUST00000158746 100 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm45331-201ENSMUST00000209868 554 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm19994-201ENSMUST00000217086 586 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm10312-201ENSMUST00000078515 489 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.28□□□□□ -0.44
PdgfrbP05622 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
PdgfrbP05622 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
PdgfrbP05622 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdgfrbP05622 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PdgfrbP05622 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
PdgfrbP05622 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PdgfrbP05622 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
PdgfrbP05622 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PdgfrbP05622 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PdgfrbP05622 Pck2-205ENSMUST00000226352 2784 ntBASIC12.27□□□□□ -0.44
PdgfrbP05622 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PdgfrbP05622 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm3096-201ENSMUST00000185770 364 ntBASIC12.27□□□□□ -0.45
PdgfrbP05622 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm38341-201ENSMUST00000195357 515 ntBASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm43179-201ENSMUST00000198797 275 ntBASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm43758-201ENSMUST00000199500 367 ntBASIC12.27□□□□□ -0.45
PdgfrbP05622 Gm43822-201ENSMUST00000200285 476 ntBASIC12.27□□□□□ -0.45
PdgfrbP05622 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PdgfrbP05622 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Olfr582-201ENSMUST00000098212 960 ntBASIC12.27□□□□□ -0.45
PdgfrbP05622 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PdgfrbP05622 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PdgfrbP05622 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms