Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.19□□□□□ -0.78
Hoxa3P02831 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hoxa3P02831 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxa3P02831 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.18□□□□□ -0.78
Hoxa3P02831 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm23200-201ENSMUST00000104379 132 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm14760-201ENSMUST00000121831 999 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm24749-201ENSMUST00000157838 343 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm23119-201ENSMUST00000158610 140 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.18□□□□□ -0.78
Hoxa3P02831 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hoxa3P02831 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm32999-201ENSMUST00000192693 562 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm19187-201ENSMUST00000206781 892 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm45598-202ENSMUST00000210719 986 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm8385-201ENSMUST00000058999 643 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Hoxa3P02831 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.18□□□□□ -0.78
Hoxa3P02831 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.18□□□□□ -0.78
Hoxa3P02831 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hoxa3P02831 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
Hoxa3P02831 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 B9d1os-201ENSMUST00000137010 674 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms