Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm14441-201ENSMUST00000121960 540 ntBASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm43630-201ENSMUST00000201550 776 ntBASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igh-VJ558P01758 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm27046-201ENSMUST00000182160 463 ntBASIC10.44□□□□□ -0.74
Igh-VJ558P01758 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igh-VJ558P01758 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms