Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Vti1aO89116 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vti1aO89116 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.09□□□□□ -0.31
Vti1aO89116 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Vti1aO89116 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.09□□□□□ -0.31
Vti1aO89116 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.09□□□□□ -0.31
Vti1aO89116 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.09□□□□□ -0.31
Vti1aO89116 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vti1aO89116 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vti1aO89116 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vti1aO89116 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.09□□□□□ -0.31
Vti1aO89116 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.09□□□□□ -0.31
Vti1aO89116 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Vti1aO89116 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.09□□□□□ -0.31
Vti1aO89116 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.09□□□□□ -0.31
Vti1aO89116 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.09□□□□□ -0.31
Vti1aO89116 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Gm9996-201ENSMUST00000070359 913 ntBASIC13.09□□□□□ -0.31
Vti1aO89116 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vti1aO89116 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vti1aO89116 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.09□□□□□ -0.31
Vti1aO89116 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vti1aO89116 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.09□□□□□ -0.31
Vti1aO89116 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vti1aO89116 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vti1aO89116 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Gm12380-201ENSMUST00000119012 544 ntBASIC13.08□□□□□ -0.32
Vti1aO89116 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.08□□□□□ -0.32
Vti1aO89116 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Vti1aO89116 Gm37666-201ENSMUST00000194110 866 ntBASIC13.08□□□□□ -0.32
Vti1aO89116 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Vti1aO89116 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vti1aO89116 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vti1aO89116 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.08□□□□□ -0.32
Vti1aO89116 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.08□□□□□ -0.32
Vti1aO89116 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.08□□□□□ -0.32
Vti1aO89116 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vti1aO89116 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vti1aO89116 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Vti1aO89116 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vti1aO89116 Gm24231-201ENSMUST00000104315 133 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Gm11989-201ENSMUST00000117240 672 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.07□□□□□ -0.32
Vti1aO89116 Gm11362-201ENSMUST00000118838 850 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Gm9022-201ENSMUST00000182482 992 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Gm9211-201ENSMUST00000182882 975 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Gm27390-201ENSMUST00000184516 176 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.07□□□□□ -0.32
Vti1aO89116 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms