Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.47□□□□□ -0.41
CopeO89079 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CopeO89079 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CopeO89079 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CopeO89079 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CopeO89079 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.46□□□□□ -0.41
CopeO89079 Gm1335-201ENSMUST00000121653 386 ntBASIC12.46□□□□□ -0.41
CopeO89079 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.46□□□□□ -0.41
CopeO89079 Gm27682-201ENSMUST00000183930 110 ntBASIC12.46□□□□□ -0.41
CopeO89079 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CopeO89079 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.46□□□□□ -0.41
CopeO89079 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.46□□□□□ -0.41
CopeO89079 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.46□□□□□ -0.41
CopeO89079 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.46□□□□□ -0.41
CopeO89079 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CopeO89079 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopeO89079 Rgr-203ENSMUST00000225070 4704 ntBASIC12.46□□□□□ -0.42
CopeO89079 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CopeO89079 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.46□□□□□ -0.42
CopeO89079 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CopeO89079 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopeO89079 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopeO89079 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CopeO89079 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CopeO89079 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CopeO89079 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.45□□□□□ -0.42
CopeO89079 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CopeO89079 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CopeO89079 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.45□□□□□ -0.42
CopeO89079 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Gm27023-201ENSMUST00000182372 285 ntBASIC12.45□□□□□ -0.42
CopeO89079 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CopeO89079 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
CopeO89079 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CopeO89079 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CopeO89079 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CopeO89079 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CopeO89079 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CopeO89079 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.45□□□□□ -0.42
CopeO89079 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CopeO89079 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CopeO89079 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CopeO89079 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CopeO89079 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms