Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CcnkO88874 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Gm13829-201ENSMUST00000119600 138 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.82□□□□□ -0.68
CcnkO88874 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm8602-201ENSMUST00000184045 607 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Gm27839-201ENSMUST00000184242 106 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm37042-201ENSMUST00000193816 581 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.82□□□□□ -0.68
CcnkO88874 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.82□□□□□ -0.68
CcnkO88874 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
CcnkO88874 Mir339-201ENSMUST00000083659 96 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Gm6091-201ENSMUST00000098307 165 ntBASIC10.82□□□□□ -0.68
CcnkO88874 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CcnkO88874 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.82□□□□□ -0.68
CcnkO88874 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CcnkO88874 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
CcnkO88874 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
CcnkO88874 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.81□□□□□ -0.68
CcnkO88874 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CcnkO88874 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
CcnkO88874 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.81□□□□□ -0.68
CcnkO88874 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 Gm23363-201ENSMUST00000175024 79 ntBASIC10.81□□□□□ -0.68
CcnkO88874 Gm22121-201ENSMUST00000175148 54 ntBASIC10.81□□□□□ -0.68
CcnkO88874 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.81□□□□□ -0.68
CcnkO88874 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CcnkO88874 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcnkO88874 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcnkO88874 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcnkO88874 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CcnkO88874 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
CcnkO88874 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CcnkO88874 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms