Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.61□□□□□ -0.39
Ttc3O88196 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Gm6114-201ENSMUST00000182472 968 ntBASIC12.61□□□□□ -0.39
Ttc3O88196 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Ttc3O88196 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Gm7600-201ENSMUST00000209657 785 ntBASIC12.61□□□□□ -0.39
Ttc3O88196 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ttc3O88196 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.61□□□□□ -0.39
Ttc3O88196 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Gm7666-201ENSMUST00000146631 819 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm21092-201ENSMUST00000178995 955 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.6□□□□□ -0.39
Ttc3O88196 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.6□□□□□ -0.39
Ttc3O88196 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ttc3O88196 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ttc3O88196 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.6□□□□□ -0.39
Ttc3O88196 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ttc3O88196 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm14441-201ENSMUST00000121960 540 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ttc3O88196 Gm10807-201ENSMUST00000177134 795 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.6□□□□□ -0.39
Ttc3O88196 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.6□□□□□ -0.39
Ttc3O88196 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ttc3O88196 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ttc3O88196 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ttc3O88196 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ttc3O88196 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ttc3O88196 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Ttc3O88196 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ttc3O88196 Gm15352-201ENSMUST00000118696 270 ntBASIC12.59□□□□□ -0.39
Ttc3O88196 Gm13937-201ENSMUST00000121000 988 ntBASIC12.59□□□□□ -0.39
Ttc3O88196 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.59□□□□□ -0.39
Ttc3O88196 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.59□□□□□ -0.39
Ttc3O88196 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ttc3O88196 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.59□□□□□ -0.39
Ttc3O88196 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.59□□□□□ -0.39
Ttc3O88196 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.59□□□□□ -0.39
Ttc3O88196 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Ttc3O88196 Gm19287-201ENSMUST00000203190 358 ntBASIC12.59□□□□□ -0.39
Ttc3O88196 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.59□□□□□ -0.39
Ttc3O88196 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ttc3O88196 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms