Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarce1O54941 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarce1O54941 Gm17150-201ENSMUST00000165577 381 ntBASIC14.37□□□□□ -0.11
Smarce1O54941 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarce1O54941 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.37□□□□□ -0.11
Smarce1O54941 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smarce1O54941 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.37□□□□□ -0.11
Smarce1O54941 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.37□□□□□ -0.11
Smarce1O54941 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarce1O54941 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarce1O54941 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.36□□□□□ -0.11
Smarce1O54941 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Mir1247-201ENSMUST00000116706 82 ntBASIC14.36□□□□□ -0.11
Smarce1O54941 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.36□□□□□ -0.11
Smarce1O54941 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarce1O54941 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarce1O54941 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.36□□□□□ -0.11
Smarce1O54941 Gm28882-201ENSMUST00000185504 314 ntBASIC14.36□□□□□ -0.11
Smarce1O54941 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarce1O54941 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.36□□□□□ -0.11
Smarce1O54941 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarce1O54941 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarce1O54941 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarce1O54941 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.35□□□□□ -0.11
Smarce1O54941 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smarce1O54941 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarce1O54941 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarce1O54941 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarce1O54941 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Gm5706-201ENSMUST00000181525 993 ntBASIC14.35□□□□□ -0.11
Smarce1O54941 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Gm27731-201ENSMUST00000185192 107 ntBASIC14.35□□□□□ -0.11
Smarce1O54941 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarce1O54941 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarce1O54941 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarce1O54941 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarce1O54941 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms