Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Per1O35973 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.1□□□□□ -0.31
Per1O35973 Gm6450-201ENSMUST00000200896 574 ntBASIC13.1□□□□□ -0.31
Per1O35973 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.1□□□□□ -0.31
Per1O35973 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.1□□□□□ -0.31
Per1O35973 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Per1O35973 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.1□□□□□ -0.31
Per1O35973 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Per1O35973 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Per1O35973 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Per1O35973 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.1□□□□□ -0.31
Per1O35973 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.1□□□□□ -0.31
Per1O35973 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.1□□□□□ -0.31
Per1O35973 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Per1O35973 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Per1O35973 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Per1O35973 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Per1O35973 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.09□□□□□ -0.31
Per1O35973 Gm8199-201ENSMUST00000121323 823 ntBASIC13.09□□□□□ -0.31
Per1O35973 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Per1O35973 Gm8815-201ENSMUST00000173809 620 ntBASIC13.09□□□□□ -0.31
Per1O35973 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.09□□□□□ -0.31
Per1O35973 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Gm38117-201ENSMUST00000194653 939 ntBASIC13.09□□□□□ -0.31
Per1O35973 Gm5714-201ENSMUST00000197343 566 ntBASIC13.09□□□□□ -0.31
Per1O35973 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Per1O35973 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.09□□□□□ -0.31
Per1O35973 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Gm10288-201ENSMUST00000084614 537 ntBASIC13.09□□□□□ -0.31
Per1O35973 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Per1O35973 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.09□□□□□ -0.31
Per1O35973 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Per1O35973 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Per1O35973 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Per1O35973 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.08□□□□□ -0.31
Per1O35973 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Per1O35973 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Per1O35973 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Per1O35973 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.08□□□□□ -0.32
Per1O35973 Gm23251-201ENSMUST00000103773 110 ntBASIC13.08□□□□□ -0.32
Per1O35973 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Gm15207-201ENSMUST00000119259 442 ntBASIC13.08□□□□□ -0.32
Per1O35973 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Per1O35973 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Mir6979-201ENSMUST00000183927 56 ntBASIC13.08□□□□□ -0.32
Per1O35973 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.08□□□□□ -0.32
Per1O35973 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.08□□□□□ -0.32
Per1O35973 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.08□□□□□ -0.32
Per1O35973 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Per1O35973 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms