Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Gm11422-201ENSMUST00000118925 1103 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Gm14395-201ENSMUST00000120494 563 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Gm25492-201ENSMUST00000157383 129 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 CT010506.1-201ENSMUST00000223673 349 ntBASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcf11G3X9Z4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Gm14071-201ENSMUST00000117817 509 ntBASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Gm15549-201ENSMUST00000121595 622 ntBASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Gm45592-201ENSMUST00000209605 1043 ntBASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Gm5996-201ENSMUST00000211110 718 ntBASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Gm45594-201ENSMUST00000211717 241 ntBASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcf11G3X9Z4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcf11G3X9Z4 Gm18986-201ENSMUST00000216029 1986 ntBASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gm12247-201ENSMUST00000117585 670 ntBASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Pcf11G3X9Z4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm16380-201ENSMUST00000077997 478 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 n-R5s211-201ENSMUST00000093689 119 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm7114-201ENSMUST00000190159 1789 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Gm45428-201ENSMUST00000209619 1789 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC18■□□□□ 0.47
Pcf11G3X9Z4 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC18■□□□□ 0.47
Pcf11G3X9Z4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms