Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm24844-201ENSMUST00000158679 127 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm23771-201ENSMUST00000178702 110 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm21092-201ENSMUST00000178995 955 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm4654-201ENSMUST00000183305 982 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm37299-201ENSMUST00000193951 826 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm45219-201ENSMUST00000205602 465 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.49□□□□□ -0.09
Ube4aE9Q735 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube4aE9Q735 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm9192-201ENSMUST00000183221 985 ntBASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm27910-201ENSMUST00000185004 107 ntBASIC14.48□□□□□ -0.09
Ube4aE9Q735 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm44506-201ENSMUST00000206278 965 ntBASIC14.48□□□□□ -0.09
Ube4aE9Q735 Gm2517-201ENSMUST00000215651 348 ntBASIC14.48□□□□□ -0.09
Ube4aE9Q735 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Map1b-203ENSMUST00000223725 2669 ntBASIC14.48□□□□□ -0.09
Ube4aE9Q735 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube4aE9Q735 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm12036-201ENSMUST00000120008 530 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm11836-201ENSMUST00000121022 441 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms