Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Scaf11E9PZM7 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Scaf11E9PZM7 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Gm34379-201ENSMUST00000195036 290 ntBASIC16.64■□□□□ 0.25
Scaf11E9PZM7 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Scaf11E9PZM7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Gm38344-201ENSMUST00000195306 1353 ntBASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Gm13204-201ENSMUST00000120110 821 ntBASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Gm8197-202ENSMUST00000193422 934 ntBASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Scaf11E9PZM7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Gm43163-201ENSMUST00000196571 442 ntBASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 AC134537.1-201ENSMUST00000219205 265 ntBASIC16.62■□□□□ 0.25
Scaf11E9PZM7 CT010506.1-201ENSMUST00000223673 349 ntBASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scaf11E9PZM7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm23400-201ENSMUST00000174994 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm26463-201ENSMUST00000175065 101 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm24332-201ENSMUST00000175102 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm25959-201ENSMUST00000175112 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm22475-201ENSMUST00000175169 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm22903-201ENSMUST00000175193 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm25070-201ENSMUST00000175237 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm24159-201ENSMUST00000175264 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm25299-201ENSMUST00000175283 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm23798-201ENSMUST00000175560 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm23802-201ENSMUST00000175565 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm25708-201ENSMUST00000177687 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm24370-201ENSMUST00000178007 102 ntBASIC16.61■□□□□ 0.25
Scaf11E9PZM7 Gm23049-201ENSMUST00000178068 102 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms