Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm28043E0CXC2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm14127-201ENSMUST00000117906 678 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm7809-201ENSMUST00000153199 742 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm3890-201ENSMUST00000182416 207 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm37424-201ENSMUST00000191727 561 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm36991-201ENSMUST00000191800 648 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm5781-201ENSMUST00000219792 443 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Gm28043E0CXC2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm24548-201ENSMUST00000158650 108 ntBASIC12.16□□□□□ -0.46
Gm28043E0CXC2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.16□□□□□ -0.46
Gm28043E0CXC2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms