Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm11964-201ENSMUST00000120982 444 ntBASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm11597-201ENSMUST00000121423 964 ntBASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm23119-201ENSMUST00000158610 140 ntBASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm43575-201ENSMUST00000196420 516 ntBASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Gm12887B1AVM1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm12928-201ENSMUST00000117115 573 ntBASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm27331-201ENSMUST00000183705 60 ntBASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm28631-201ENSMUST00000190740 334 ntBASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm38092-201ENSMUST00000195600 653 ntBASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Gm12887B1AVM1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm12887B1AVM1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm12887B1AVM1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm12887B1AVM1 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.74□□□□□ -0.85
Gm12887B1AVM1 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Gm12887B1AVM1 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.74□□□□□ -0.85
Gm12887B1AVM1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.74□□□□□ -0.85
Gm12887B1AVM1 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms