Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Gm8737-201ENSMUST00000122208 642 ntBASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scn3aA2ASI5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm37905-201ENSMUST00000195310 341 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm7600-201ENSMUST00000209657 785 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scn3aA2ASI5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.38□□□□□ -0.27
Scn3aA2ASI5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm13937-201ENSMUST00000121000 988 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm11960-201ENSMUST00000122068 925 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm37981-201ENSMUST00000194280 535 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm6108-201ENSMUST00000208365 367 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm7940-201ENSMUST00000218195 769 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn3aA2ASI5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms