Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm12203-201ENSMUST00000118235 598 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm13829-201ENSMUST00000119600 138 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm12209-201ENSMUST00000120089 596 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm26185-201ENSMUST00000157692 266 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm38297-201ENSMUST00000195122 1057 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm37497-201ENSMUST00000195830 798 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm6266-201ENSMUST00000203844 806 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm7561-201ENSMUST00000211203 886 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm29705-201ENSMUST00000212598 474 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm8598-201ENSMUST00000221184 836 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav6n-6A0A075B6B2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm4271-201ENSMUST00000174444 973 ntBASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms