Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.8□□□□□ -0.52
Cdh17Q9R100 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh17Q9R100 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.79□□□□□ -0.52
Cdh17Q9R100 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.79□□□□□ -0.52
Cdh17Q9R100 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Snora78-201ENSMUST00000158630 128 ntBASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm5706-201ENSMUST00000181525 993 ntBASIC11.79□□□□□ -0.52
Cdh17Q9R100 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdh17Q9R100 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm15824-201ENSMUST00000119516 955 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm11425-201ENSMUST00000119608 498 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm4986-201ENSMUST00000119731 549 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm5950-201ENSMUST00000213337 772 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.78□□□□□ -0.52
Cdh17Q9R100 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh17Q9R100 Gm9396-201ENSMUST00000076703 567 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms