Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm12997-201ENSMUST00000120207 640 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm14017-201ENSMUST00000121934 386 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm45186-201ENSMUST00000206874 478 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Clcf1Q9QZM3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Clcf1Q9QZM3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm24231-201ENSMUST00000104315 133 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm26361-201ENSMUST00000158868 186 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm18304-201ENSMUST00000189162 546 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.02□□□□□ -0.65
Clcf1Q9QZM3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.01□□□□□ -0.65
Clcf1Q9QZM3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms