Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Mir1247-201ENSMUST00000116706 82 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm4986-201ENSMUST00000119731 549 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm2991-201ENSMUST00000173338 480 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm6621-201ENSMUST00000193251 772 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm7046-201ENSMUST00000221351 977 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm24136-201ENSMUST00000083374 165 ntBASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61a2Q9JLR1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm10434-201ENSMUST00000101158 471 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm13736-201ENSMUST00000119272 253 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm18304-201ENSMUST00000189162 546 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm37489-201ENSMUST00000191883 159 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm9368-201ENSMUST00000219348 831 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC10.93□□□□□ -0.66
Sec61a2Q9JLR1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms