Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ube4bQ9ES00 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ube4bQ9ES00 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.64□□□□□ -0.55
Ube4bQ9ES00 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm7488-201ENSMUST00000117148 684 ntBASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm37917-201ENSMUST00000194711 392 ntBASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.63□□□□□ -0.55
Ube4bQ9ES00 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ube4bQ9ES00 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Mir7654-201ENSMUST00000185082 70 ntBASIC11.62□□□□□ -0.55
Ube4bQ9ES00 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ube4bQ9ES00 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ube4bQ9ES00 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms