Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lima1Q9ERG0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lima1Q9ERG0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm27731-201ENSMUST00000185192 107 ntBASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm18187-201ENSMUST00000196476 984 ntBASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Snora73a-201ENSMUST00000082453 205 ntBASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm24526-201ENSMUST00000082921 158 ntBASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lima1Q9ERG0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.94□□□□□ -0.5
Lima1Q9ERG0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms