Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chmp5Q9D7S9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Gm42706-201ENSMUST00000199733 1910 ntBASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Gm42937-201ENSMUST00000197360 752 ntBASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chmp5Q9D7S9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm44086-201ENSMUST00000203251 2349 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm6222-202ENSMUST00000182143 629 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chmp5Q9D7S9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Gm29127-201ENSMUST00000188304 517 ntBASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chmp5Q9D7S9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms