Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm16296-201ENSMUST00000159905 325 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm42612-201ENSMUST00000197986 623 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm43170-201ENSMUST00000199827 612 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm24136-201ENSMUST00000083374 165 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.18□□□□□ -0.46
Trim42Q9D2H5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Syt7-204ENSMUST00000223586 1344 ntBASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Gm37720-201ENSMUST00000195497 1241 ntBASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim42Q9D2H5 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Mir7654-201ENSMUST00000185082 70 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim42Q9D2H5 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms