Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ssu72Q9CY97 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm8146-201ENSMUST00000192106 1847 ntBASIC12□□□□□ -0.49
Ssu72Q9CY97 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm12091-201ENSMUST00000146791 830 ntBASIC12□□□□□ -0.49
Ssu72Q9CY97 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Mir6977-201ENSMUST00000184960 64 ntBASIC12□□□□□ -0.49
Ssu72Q9CY97 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm8515-201ENSMUST00000194852 576 ntBASIC12□□□□□ -0.49
Ssu72Q9CY97 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm45691-201ENSMUST00000206905 1120 ntBASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12□□□□□ -0.49
Ssu72Q9CY97 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12□□□□□ -0.49
Ssu72Q9CY97 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ssu72Q9CY97 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms