Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm18304-201ENSMUST00000189162 546 ntBASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm38266-201ENSMUST00000194931 421 ntBASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm24136-201ENSMUST00000083374 165 ntBASIC12.13□□□□□ -0.47
Trim33Q99PP7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trim33Q99PP7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm13570-201ENSMUST00000140763 309 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm9630-201ENSMUST00000178304 885 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm28941-201ENSMUST00000185536 1017 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm32999-201ENSMUST00000192693 562 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm30285-201ENSMUST00000214614 422 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.12□□□□□ -0.47
Trim33Q99PP7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim33Q99PP7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gm11222-201ENSMUST00000119005 738 ntBASIC12.11□□□□□ -0.47
Trim33Q99PP7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.11□□□□□ -0.47
Trim33Q99PP7 Gm23119-201ENSMUST00000158610 140 ntBASIC12.11□□□□□ -0.47
Trim33Q99PP7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms