Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpa1Q8VEE4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpa1Q8VEE4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm16479-201ENSMUST00000121706 932 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm9022-201ENSMUST00000182482 992 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm4034-201ENSMUST00000187674 480 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm37042-201ENSMUST00000193816 581 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Rpa1Q8VEE4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm13333-201ENSMUST00000119424 781 ntBASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm26185-201ENSMUST00000157692 266 ntBASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm45668-201ENSMUST00000211271 493 ntBASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpa1Q8VEE4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms