Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm23272-201ENSMUST00000104053 129 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm12516-201ENSMUST00000120819 385 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm13937-201ENSMUST00000121000 988 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm10807-201ENSMUST00000177134 795 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm6114-201ENSMUST00000182472 968 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm2875-201ENSMUST00000211333 360 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.03■□□□□ 0.32
Cd109Q8R422 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.03■□□□□ 0.32
Cd109Q8R422 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm5451-201ENSMUST00000080545 579 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Gm8522-201ENSMUST00000118416 1929 ntBASIC17.03■□□□□ 0.32
Cd109Q8R422 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC17.03■□□□□ 0.32
Cd109Q8R422 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cd109Q8R422 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC17.02■□□□□ 0.32
Cd109Q8R422 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cd109Q8R422 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC17.02■□□□□ 0.32
Cd109Q8R422 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
Cd109Q8R422 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd109Q8R422 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cd109Q8R422 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Cd109Q8R422 Gm25072-201ENSMUST00000175233 235 ntBASIC17.02■□□□□ 0.31
Cd109Q8R422 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cd109Q8R422 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cd109Q8R422 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm45199-201ENSMUST00000207640 1507 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm14942-201ENSMUST00000119642 336 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm6407-201ENSMUST00000176468 549 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm45484-201ENSMUST00000210310 1141 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm9661-201ENSMUST00000221611 1122 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 AC154257.1-202ENSMUST00000224729 843 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Gm26616-202ENSMUST00000195676 3107 ntBASIC17.01■□□□□ 0.31
Cd109Q8R422 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cd109Q8R422 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd109Q8R422 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms