Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a1Q8K4Z5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm13296-201ENSMUST00000117854 997 ntBASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm14247-201ENSMUST00000120950 237 ntBASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm26361-201ENSMUST00000158868 186 ntBASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a1Q8K4Z5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a1Q8K4Z5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.83□□□□□ -0.03
Sf3a1Q8K4Z5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a1Q8K4Z5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Gm7722-201ENSMUST00000120646 741 ntBASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a1Q8K4Z5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms