Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm22189-201ENSMUST00000103822 86 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm11618-201ENSMUST00000117946 267 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf4Q8K4J2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm12036-201ENSMUST00000120008 530 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm16479-201ENSMUST00000121706 932 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm23119-201ENSMUST00000158610 140 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm27989-201ENSMUST00000184721 107 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm37042-201ENSMUST00000193816 581 ntBASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ebf4Q8K4J2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm11964-201ENSMUST00000120982 444 ntBASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm11597-201ENSMUST00000121423 964 ntBASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm5637-201ENSMUST00000153890 1119 ntBASIC11□□□□□ -0.65
Ebf4Q8K4J2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm38092-201ENSMUST00000195600 653 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms