Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.86□□□□□ -0.51
Rab43Q8CG50 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab43Q8CG50 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm11509-201ENSMUST00000117358 325 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm13809-201ENSMUST00000117921 597 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm12029-201ENSMUST00000120073 832 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm8566-201ENSMUST00000120174 465 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm27438-201ENSMUST00000183480 110 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm28686-201ENSMUST00000187404 609 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.85□□□□□ -0.51
Rab43Q8CG50 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rab43Q8CG50 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.84□□□□□ -0.51
Rab43Q8CG50 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.84□□□□□ -0.51
Rab43Q8CG50 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm13888-201ENSMUST00000119148 422 ntBASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm8199-201ENSMUST00000121323 823 ntBASIC11.84□□□□□ -0.51
Rab43Q8CG50 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm17391-201ENSMUST00000171036 126 ntBASIC11.84□□□□□ -0.51
Rab43Q8CG50 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.84□□□□□ -0.51
Rab43Q8CG50 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rab43Q8CG50 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Rab43Q8CG50 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.51
Rab43Q8CG50 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rab43Q8CG50 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rab43Q8CG50 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.83□□□□□ -0.51
Rab43Q8CG50 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rab43Q8CG50 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.83□□□□□ -0.52
Rab43Q8CG50 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rab43Q8CG50 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms