Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28aQ8CEI3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28aQ8CEI3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28aQ8CEI3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc28aQ8CEI3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28aQ8CEI3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc28aQ8CEI3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gm1335-201ENSMUST00000121653 386 ntBASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gm8738-201ENSMUST00000172606 329 ntBASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc28aQ8CEI3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc28aQ8CEI3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28aQ8CEI3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms