Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm11989-201ENSMUST00000117240 672 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm12314-201ENSMUST00000118104 538 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm11362-201ENSMUST00000118838 850 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm13045-201ENSMUST00000119019 712 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Rmrp-201ENSMUST00000157463 271 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm5616-201ENSMUST00000165252 384 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm8741-201ENSMUST00000174736 384 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm7593-201ENSMUST00000187246 644 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc17Q8CE13 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc17Q8CE13 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Gm13035-201ENSMUST00000117496 342 ntBASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Gm9996-201ENSMUST00000070359 913 ntBASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc17Q8CE13 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc17Q8CE13 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms