Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm9899-201ENSMUST00000065519 555 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trub1Q8C0D0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.49□□□□□ -0.41
Trub1Q8C0D0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm11989-201ENSMUST00000117240 672 ntBASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm14109-201ENSMUST00000118814 309 ntBASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm11362-201ENSMUST00000118838 850 ntBASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trub1Q8C0D0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Gm15610-201ENSMUST00000120584 195 ntBASIC12.48□□□□□ -0.41
Trub1Q8C0D0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Gm27046-201ENSMUST00000182160 463 ntBASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Gzmn-202ENSMUST00000225535 989 ntBASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trub1Q8C0D0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trub1Q8C0D0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms