Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp47Q8BY87 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp47Q8BY87 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp47Q8BY87 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp47Q8BY87 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp47Q8BY87 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm8815-201ENSMUST00000173809 620 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm34767-201ENSMUST00000191813 1062 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm37835-201ENSMUST00000193305 361 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm43365-201ENSMUST00000196522 2106 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm6867-201ENSMUST00000219165 425 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Ginm1-202ENSMUST00000065124 300 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp47Q8BY87 Gm20554-201ENSMUST00000177421 2352 ntBASIC17.02■□□□□ 0.32
Usp47Q8BY87 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp47Q8BY87 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 AC093022.4-203ENSMUST00000228523 2657 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Gm9062-201ENSMUST00000117712 727 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Gm8546-201ENSMUST00000178288 1264 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Gm37986-201ENSMUST00000193285 383 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 Gm43947-201ENSMUST00000203019 959 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 AC154276.3-201ENSMUST00000227643 998 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp47Q8BY87 Ntng1-201ENSMUST00000051253 327 ntBASIC17.02■□□□□ 0.31
Usp47Q8BY87 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC17.02■□□□□ 0.31
Usp47Q8BY87 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Usp47Q8BY87 AC156031.2-201ENSMUST00000213107 3310 ntBASIC17.01■□□□□ 0.31
Usp47Q8BY87 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Usp47Q8BY87 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm13809-201ENSMUST00000117921 597 ntBASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm15207-201ENSMUST00000119259 442 ntBASIC17.01■□□□□ 0.31
Usp47Q8BY87 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm13263-201ENSMUST00000121271 838 ntBASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp47Q8BY87 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gm18393-201ENSMUST00000208349 1131 ntBASIC17.01■□□□□ 0.31
Usp47Q8BY87 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp47Q8BY87 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp47Q8BY87 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC17■□□□□ 0.31
Usp47Q8BY87 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Usp47Q8BY87 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp47Q8BY87 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp47Q8BY87 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 AC138329.2-201ENSMUST00000225579 1842 ntBASIC17■□□□□ 0.31
Usp47Q8BY87 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Gm24891-201ENSMUST00000104391 136 ntBASIC17■□□□□ 0.31
Usp47Q8BY87 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp47Q8BY87 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms