Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.89□□□□□ -0.35
Trerf1Q8BXJ2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Mospd4-201ENSMUST00000180618 576 ntBASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.88□□□□□ -0.35
Trerf1Q8BXJ2 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm12241-201ENSMUST00000118330 726 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm14723-201ENSMUST00000118686 215 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm3961-201ENSMUST00000204425 994 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm9368-201ENSMUST00000219348 831 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm7046-201ENSMUST00000221351 977 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trerf1Q8BXJ2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms