Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.69□□□□□ -0.7
SprnQ8BWU1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SprnQ8BWU1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm1335-201ENSMUST00000121653 386 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm27514-201ENSMUST00000183692 110 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm44958-201ENSMUST00000203734 736 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm45880-201ENSMUST00000213041 853 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm19163-201ENSMUST00000223313 780 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gm9823-201ENSMUST00000051212 327 ntBASIC10.68□□□□□ -0.7
SprnQ8BWU1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SprnQ8BWU1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms