Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Gm20493-201ENSMUST00000173706 213 ntBASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Gm30055-201ENSMUST00000203175 803 ntBASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Gm17541-201ENSMUST00000080062 525 ntBASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smg1Q8BKX6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Gm44315-201ENSMUST00000203041 219 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Gm6606-201ENSMUST00000193613 947 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Gm9644-201ENSMUST00000212828 1183 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Gm26782-203ENSMUST00000227103 751 ntBASIC9.96□□□□□ -0.81
Smg1Q8BKX6 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smg1Q8BKX6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Gm8152-201ENSMUST00000120842 637 ntBASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smg1Q8BKX6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Mir8093-201ENSMUST00000185043 137 ntBASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Gm37207-201ENSMUST00000194284 296 ntBASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smg1Q8BKX6 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms