Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Gm7584-201ENSMUST00000175829 940 ntBASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Gm26956-201ENSMUST00000182176 986 ntBASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.23□□□□□ -0.13
Samm50Q8BGH2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Samm50Q8BGH2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm14381-201ENSMUST00000122105 414 ntBASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm2546-201ENSMUST00000182630 991 ntBASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm35960-201ENSMUST00000202712 767 ntBASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Samm50Q8BGH2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm11222-201ENSMUST00000119005 738 ntBASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm11964-201ENSMUST00000120982 444 ntBASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Samm50Q8BGH2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Samm50Q8BGH2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Samm50Q8BGH2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Samm50Q8BGH2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Samm50Q8BGH2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.14
Samm50Q8BGH2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms