Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm25890-201ENSMUST00000177643 165 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm22614-201ENSMUST00000178300 165 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm22042-201ENSMUST00000082989 165 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm26110-201ENSMUST00000083971 165 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpp38Q80UU2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Gm17376-201ENSMUST00000166016 84 ntBASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.09□□□□□ -0.47
Rpp38Q80UU2 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpp38Q80UU2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Rpp38Q80UU2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rpp38Q80UU2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Rpp38Q80UU2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms