Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm3551-201ENSMUST00000190750 664 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm5714-201ENSMUST00000197343 566 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 AC154176.1-201ENSMUST00000225897 220 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.67□□□□□ -0.7
Snrnp40Q6PE01 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm22877-201ENSMUST00000175451 105 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm5298-201ENSMUST00000201122 892 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Snrnp40Q6PE01 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm25076-201ENSMUST00000104098 132 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm4310-201ENSMUST00000177847 889 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm17889-201ENSMUST00000198410 598 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm45120-201ENSMUST00000208880 408 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Gm19009-201ENSMUST00000223072 823 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Snrnp40Q6PE01 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms