Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf220Q6PDX6 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm26035-201ENSMUST00000083065 308 ntBASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf220Q6PDX6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm14350-201ENSMUST00000116642 640 ntBASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm44855-201ENSMUST00000205725 362 ntBASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms