Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm23912-201ENSMUST00000104687 87 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm14247-201ENSMUST00000120950 237 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm38317-201ENSMUST00000195564 343 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm44967-201ENSMUST00000207047 631 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm13097-201ENSMUST00000210722 397 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm10312-201ENSMUST00000078515 489 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcc2Q6PDG5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smarcc2Q6PDG5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcc2Q6PDG5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Rprl1-201ENSMUST00000158050 327 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm8885-201ENSMUST00000189382 598 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm18711-201ENSMUST00000199341 750 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm18056-201ENSMUST00000207670 568 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm18061-201ENSMUST00000208350 562 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm18063-201ENSMUST00000208529 568 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Gm18052-201ENSMUST00000208750 559 ntBASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.13□□□□□ -0.15
Smarcc2Q6PDG5 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms