Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Gm19212-201ENSMUST00000216642 862 ntBASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.25□□□□□ -0.13
Scaf8Q6DID3 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.25□□□□□ -0.13
Scaf8Q6DID3 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.25□□□□□ -0.13
Scaf8Q6DID3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scaf8Q6DID3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm8956-201ENSMUST00000203939 825 ntBASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm18204-201ENSMUST00000209835 793 ntBASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Scaf8Q6DID3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Mir6407-201ENSMUST00000184510 101 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm3551-201ENSMUST00000190750 664 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Ighv10-4-201ENSMUST00000193702 299 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm38217-201ENSMUST00000194358 910 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.23□□□□□ -0.13
Scaf8Q6DID3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scaf8Q6DID3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms