Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ClpbQ60649 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.66□□□□□ -0.54
ClpbQ60649 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.66□□□□□ -0.54
ClpbQ60649 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ClpbQ60649 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.66□□□□□ -0.54
ClpbQ60649 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
ClpbQ60649 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClpbQ60649 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm24830-201ENSMUST00000102024 166 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm15236-201ENSMUST00000117309 379 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm12314-201ENSMUST00000118104 538 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm14109-201ENSMUST00000118814 309 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.65□□□□□ -0.54
ClpbQ60649 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm25890-201ENSMUST00000177643 165 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm22614-201ENSMUST00000178300 165 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm22042-201ENSMUST00000082989 165 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm26232-201ENSMUST00000083360 166 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Gm26110-201ENSMUST00000083971 165 ntBASIC11.65□□□□□ -0.54
ClpbQ60649 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClpbQ60649 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClpbQ60649 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ClpbQ60649 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ClpbQ60649 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
ClpbQ60649 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ClpbQ60649 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.65□□□□□ -0.55
ClpbQ60649 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ClpbQ60649 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
ClpbQ60649 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ClpbQ60649 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
ClpbQ60649 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms