Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim41Q5NCC3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim41Q5NCC3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim41Q5NCC3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim41Q5NCC3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Ighv2-1-201ENSMUST00000170946 353 ntBASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Gm5705-201ENSMUST00000066241 711 ntBASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim41Q5NCC3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Gm26368-201ENSMUST00000157826 118 ntBASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Gm18201-201ENSMUST00000174735 875 ntBASIC21.08■□□□□ 0.97
Trim41Q5NCC3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim41Q5NCC3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Gm43447-201ENSMUST00000198471 1535 ntBASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim41Q5NCC3 Gm28323-201ENSMUST00000186817 2499 ntBASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Gm14585-201ENSMUST00000120713 634 ntBASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Gm8199-201ENSMUST00000121323 823 ntBASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Gm10288-201ENSMUST00000084614 537 ntBASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Gm44260-201ENSMUST00000204946 2094 ntBASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC21.07■□□□□ 0.96
Trim41Q5NCC3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Gm9797-202ENSMUST00000218003 294 ntBASIC21.06■□□□□ 0.96
Trim41Q5NCC3 AC153962.2-201ENSMUST00000219417 550 ntBASIC21.06■□□□□ 0.96
Trim41Q5NCC3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Gm15784-201ENSMUST00000120260 1462 ntBASIC21.06■□□□□ 0.96
Trim41Q5NCC3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Trim41Q5NCC3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms