Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm40466-201ENSMUST00000212174 422 ntBASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim43aQ3TL54 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm24830-201ENSMUST00000102024 166 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm37424-201ENSMUST00000191727 561 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm26232-201ENSMUST00000083360 166 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trim43aQ3TL54 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gm12957-201ENSMUST00000117835 377 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gm16177-201ENSMUST00000120728 718 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43aQ3TL54 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms