Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pdlim7Q3TJD7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm13549-201ENSMUST00000118339 796 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm5419-201ENSMUST00000119301 527 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm14942-201ENSMUST00000119642 336 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm44124-201ENSMUST00000204159 472 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.55□□□□□ -0.24
Pdlim7Q3TJD7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm14247-201ENSMUST00000120950 237 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm4862-201ENSMUST00000170405 438 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Mir6407-201ENSMUST00000184510 101 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm44506-201ENSMUST00000206278 965 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Mt1-202ENSMUST00000211807 1085 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pdlim7Q3TJD7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim7Q3TJD7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim7Q3TJD7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pdlim7Q3TJD7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms