Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Gm26464-201ENSMUST00000157094 305 ntBASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hddc2Q3SXD3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Gm5279-201ENSMUST00000199575 745 ntBASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Gm19078-201ENSMUST00000206311 727 ntBASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hddc2Q3SXD3 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hddc2Q3SXD3 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms